Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 AL773604.1-201ENST00000617417 272 ntBASIC15.24■□□□□ 0.03
RCE1Q9Y256 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 AC008735.5-201ENST00000623544 497 ntBASIC15.24■□□□□ 0.03
RCE1Q9Y256 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCE1Q9Y256 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.24■□□□□ 0.03
RCE1Q9Y256 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 KRT18P27-201ENST00000427733 1299 ntBASIC15.23■□□□□ 0.03
RCE1Q9Y256 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 AL805961.1-202ENST00000641562 540 ntBASIC15.23■□□□□ 0.03
RCE1Q9Y256 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.23■□□□□ 0.03
RCE1Q9Y256 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RCE1Q9Y256 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCE1Q9Y256 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 AP002414.1-201ENST00000391405 1147 ntBASIC15.22■□□□□ 0.03
RCE1Q9Y256 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 ELK2BP-201ENST00000415014 1224 ntBASIC15.22■□□□□ 0.03
RCE1Q9Y256 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 MIR1199-201ENST00000621445 119 ntBASIC15.22■□□□□ 0.03
RCE1Q9Y256 PGM5P2-202ENST00000637225 1043 ntBASIC15.22■□□□□ 0.03
RCE1Q9Y256 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 PCDHB17P-201ENST00000539533 2393 ntBASIC15.22■□□□□ 0.03
RCE1Q9Y256 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 AC005915.1-201ENST00000624912 2018 ntBASIC15.22■□□□□ 0.03
RCE1Q9Y256 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCE1Q9Y256 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCE1Q9Y256 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms