Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 RNF216P1-203ENST00000404404 2427 ntBASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDZRN3Q9UPQ7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 ACTG1P4-201ENST00000425123 1122 ntBASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 FAM185BP-201ENST00000443595 716 ntBASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 AC109322.1-201ENST00000524499 1264 ntBASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 AJ011932.1-201ENST00000621707 465 ntBASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDZRN3Q9UPQ7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDZRN3Q9UPQ7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PDZRN3Q9UPQ7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDZRN3Q9UPQ7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 MIR4745-201ENST00000577608 62 ntBASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 AC005498.2-205ENST00000593218 784 ntBASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
PDZRN3Q9UPQ7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 PI4KAP1-204ENST00000612579 1703 ntBASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AC092068.3-201ENST00000587894 2016 ntBASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.63■■□□□ 1.05
PDZRN3Q9UPQ7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms