Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB4Q9UN71 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 AL353593.2-201ENST00000602529 1483 ntBASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 AL845331.1-201ENST00000424978 1190 ntBASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 AL049597.2-201ENST00000565575 961 ntBASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 NTF6B-201ENST00000591913 560 ntBASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGB4Q9UN71 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AC003669.1-201ENST00000334569 611 ntBASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AL031133.1-201ENST00000406807 723 ntBASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AC124947.2-201ENST00000547118 1133 ntBASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGB4Q9UN71 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB4Q9UN71 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGB4Q9UN71 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGB4Q9UN71 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms