Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PCDH8P1-201ENST00000428983 2773 ntBASIC19■□□□□ 0.63
HDAC6Q9UBN7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19■□□□□ 0.63
HDAC6Q9UBN7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19■□□□□ 0.63
HDAC6Q9UBN7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 AC107918.2-201ENST00000530817 355 ntBASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.99■□□□□ 0.63
HDAC6Q9UBN7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC002056.1-201ENST00000395613 760 ntBASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC023141.5-201ENST00000458585 616 ntBASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC092364.2-202ENST00000597012 1073 ntBASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC093512.1-201ENST00000617969 520 ntBASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 LYSMD4-203ENST00000378904 2122 ntBASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HDAC6Q9UBN7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 FAM8A3P-201ENST00000427218 844 ntBASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 AC093520.2-201ENST00000561830 333 ntBASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 AC099522.2-201ENST00000607001 744 ntBASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 AL139384.1-201ENST00000612143 3047 ntBASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC6Q9UBN7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms