Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 AC064836.3-201ENST00000607928 673 ntBASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 NKILA-202ENST00000614771 2598 ntBASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
CUEDC1Q9NWM3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 AC129492.6-201ENST00000611383 1305 ntBASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 AC134684.3-201ENST00000641758 218 ntBASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.27■□□□□ 0.2
CUEDC1Q9NWM3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 AC011676.5-201ENST00000624864 2660 ntBASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 SLC22A20-204ENST00000530038 1673 ntBASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.27■□□□□ 0.19
CUEDC1Q9NWM3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AC004832.2-201ENST00000426397 482 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 KRT18P2-201ENST00000447938 1258 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CXCL1P1-201ENST00000502804 216 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AC018845.2-201ENST00000568326 409 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms