Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AC106795.1-205ENST00000512851 1056 ntBASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 TPSP2-201ENST00000561760 610 ntBASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AC120114.3-201ENST00000611923 658 ntBASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AC079602.3-201ENST00000623931 403 ntBASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 AC126177.1-201ENST00000547829 2218 ntBASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.06■□□□□ 0.16
CCM2LQ9NUG4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 AL136038.4-201ENST00000603606 1261 ntBASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCM2LQ9NUG4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 DRAXINP1-201ENST00000437611 948 ntBASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 TOB2P1-201ENST00000469761 992 ntBASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 AC012615.1-201ENST00000565797 1299 ntBASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.04■□□□□ 0.16
CCM2LQ9NUG4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms