Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 AC004817.3-201ENST00000602957 2129 ntBASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC42SE2Q9NRR3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 POM121L3P-201ENST00000419331 1163 ntBASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 DRAXINP1-201ENST00000437611 948 ntBASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 KRT17P6-201ENST00000453795 1220 ntBASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 BNIP3P18-201ENST00000593976 575 ntBASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC42SE2Q9NRR3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 NSUN5P1-202ENST00000421140 1535 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 NSUN5P2-203ENST00000457352 1529 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 AC005052.1-201ENST00000625181 2492 ntBASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC42SE2Q9NRR3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms