Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4Q9NQC3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 RPS2P55-201ENST00000397318 883 ntBASIC19.95■□□□□ 0.78
RTN4Q9NQC3 KRT18P23-201ENST00000435622 1283 ntBASIC19.95■□□□□ 0.78
RTN4Q9NQC3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 AC107956.1-201ENST00000494359 873 ntBASIC19.95■□□□□ 0.78
RTN4Q9NQC3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.95■□□□□ 0.78
RTN4Q9NQC3 ITM2C-210ENST00000620962 501 ntBASIC19.95■□□□□ 0.78
RTN4Q9NQC3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4Q9NQC3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 ABHD17AP1-201ENST00000358206 933 ntBASIC19.94■□□□□ 0.78
RTN4Q9NQC3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 AC113410.3-201ENST00000623366 203 ntBASIC19.94■□□□□ 0.78
RTN4Q9NQC3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTN4Q9NQC3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.93■□□□□ 0.78
RTN4Q9NQC3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms