Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.55■□□□□ 0.72
EFCC1Q9HA90 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 HTR7P1-202ENST00000624664 4411 ntBASIC19.54■□□□□ 0.72
EFCC1Q9HA90 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 HMGA1P7-201ENST00000406908 502 ntBASIC19.54■□□□□ 0.72
EFCC1Q9HA90 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 ALG1L8P-201ENST00000533887 760 ntBASIC19.54■□□□□ 0.72
EFCC1Q9HA90 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.54■□□□□ 0.72
EFCC1Q9HA90 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCC1Q9HA90 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
EFCC1Q9HA90 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 AC027369.6-201ENST00000525520 931 ntBASIC19.52■□□□□ 0.72
EFCC1Q9HA90 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EFCC1Q9HA90 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms