Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NELFAQ9H3P2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NELFAQ9H3P2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NELFAQ9H3P2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NELFAQ9H3P2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
NELFAQ9H3P2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.03■□□□□ -0
NELFAQ9H3P2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.02■□□□□ -0
NELFAQ9H3P2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.02■□□□□ -0
NELFAQ9H3P2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.02■□□□□ -0
NELFAQ9H3P2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NELFAQ9H3P2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.02■□□□□ -0
NELFAQ9H3P2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.02■□□□□ -0
NELFAQ9H3P2 PAWRP1-201ENST00000451083 565 ntBASIC15.02■□□□□ -0
NELFAQ9H3P2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NELFAQ9H3P2 RNA5SP415-201ENST00000517246 115 ntBASIC15.02■□□□□ -0
NELFAQ9H3P2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.02■□□□□ -0
NELFAQ9H3P2 UNC93B6-202ENST00000528242 690 ntBASIC15.02■□□□□ -0
NELFAQ9H3P2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
NELFAQ9H3P2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.02■□□□□ -0
NELFAQ9H3P2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.02■□□□□ -0
NELFAQ9H3P2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
NELFAQ9H3P2 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.02■□□□□ -0
NELFAQ9H3P2 AC005593.1-201ENST00000624894 515 ntBASIC15.02■□□□□ -0
NELFAQ9H3P2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NELFAQ9H3P2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 AC009947.1-201ENST00000444350 727 ntBASIC15.01□□□□□ -0.01
NELFAQ9H3P2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 AC108073.2-201ENST00000464002 357 ntBASIC15.01□□□□□ -0.01
NELFAQ9H3P2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 AC145285.3-201ENST00000564603 959 ntBASIC15.01□□□□□ -0.01
NELFAQ9H3P2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NELFAQ9H3P2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15□□□□□ -0.01
NELFAQ9H3P2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15□□□□□ -0.01
NELFAQ9H3P2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15□□□□□ -0.01
NELFAQ9H3P2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15□□□□□ -0.01
NELFAQ9H3P2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NELFAQ9H3P2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NELFAQ9H3P2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
NELFAQ9H3P2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NELFAQ9H3P2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NELFAQ9H3P2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms