Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC68Q9H2F9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 AC243591.1-201ENST00000452967 1364 ntBASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 SART3-203ENST00000546611 1184 ntBASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 AGGF1P2-201ENST00000426656 2106 ntBASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC68Q9H2F9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 CICP6-201ENST00000457191 2729 ntBASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 AP002414.1-201ENST00000391405 1147 ntBASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 IFNL4P1-201ENST00000607083 540 ntBASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 AC012313.10-201ENST00000623509 926 ntBASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 PCDHB17P-201ENST00000539533 2393 ntBASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC68Q9H2F9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC68Q9H2F9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC68Q9H2F9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC68Q9H2F9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC68Q9H2F9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC68Q9H2F9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
CCDC68Q9H2F9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC68Q9H2F9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms