Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 SCARNA2-201ENST00000458748 420 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 BX005266.1-201ENST00000473402 457 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.92□□□□□ -0.18
S1PR3Q99500 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
S1PR3Q99500 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 AC008608.2-201ENST00000606089 416 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 AL691432.3-201ENST00000621860 400 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.92□□□□□ -0.18
S1PR3Q99500 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
S1PR3Q99500 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.92□□□□□ -0.18
S1PR3Q99500 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.92□□□□□ -0.18
S1PR3Q99500 TNRC18P3-201ENST00000441896 2691 ntBASIC13.92□□□□□ -0.18
S1PR3Q99500 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
S1PR3Q99500 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
S1PR3Q99500 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
S1PR3Q99500 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 AC079328.2-201ENST00000561241 3354 ntBASIC13.91□□□□□ -0.18
S1PR3Q99500 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
S1PR3Q99500 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 AKR1C7P-201ENST00000305623 895 ntBASIC13.91□□□□□ -0.18
S1PR3Q99500 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.91□□□□□ -0.18
S1PR3Q99500 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.91□□□□□ -0.18
S1PR3Q99500 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.91□□□□□ -0.18
S1PR3Q99500 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 NKAPP1-205ENST00000585790 367 ntBASIC13.91□□□□□ -0.18
S1PR3Q99500 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.91□□□□□ -0.18
S1PR3Q99500 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 AL589182.2-201ENST00000619332 1049 ntBASIC13.91□□□□□ -0.18
S1PR3Q99500 AL355877.3-201ENST00000622820 899 ntBASIC13.91□□□□□ -0.18
S1PR3Q99500 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
S1PR3Q99500 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
S1PR3Q99500 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.91□□□□□ -0.18
S1PR3Q99500 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
S1PR3Q99500 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.91□□□□□ -0.18
S1PR3Q99500 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.9□□□□□ -0.18
S1PR3Q99500 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
S1PR3Q99500 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.9□□□□□ -0.18
S1PR3Q99500 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.9□□□□□ -0.18
S1PR3Q99500 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 AC067930.6-201ENST00000623257 4947 ntBASIC13.9□□□□□ -0.18
S1PR3Q99500 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
S1PR3Q99500 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
S1PR3Q99500 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.9□□□□□ -0.18
S1PR3Q99500 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
S1PR3Q99500 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.9□□□□□ -0.18
S1PR3Q99500 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.9□□□□□ -0.18
S1PR3Q99500 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms