Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 KRT8P39-201ENST00000396270 1433 ntBASIC13.97□□□□□ -0.17
GAFA1Q96PS6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 AC092865.6-201ENST00000642101 219 ntBASIC13.96□□□□□ -0.17
GAFA1Q96PS6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.96□□□□□ -0.17
GAFA1Q96PS6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GAFA1Q96PS6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GAFA1Q96PS6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 AC023274.1-201ENST00000418278 595 ntBASIC13.95□□□□□ -0.18
GAFA1Q96PS6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 PGAM5P1-201ENST00000518923 814 ntBASIC13.95□□□□□ -0.18
GAFA1Q96PS6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 PDPK2P-202ENST00000562415 1191 ntBASIC13.95□□□□□ -0.18
GAFA1Q96PS6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 AL031055.1-201ENST00000606362 631 ntBASIC13.95□□□□□ -0.18
GAFA1Q96PS6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 UBALD1-205ENST00000590891 2641 ntBASIC13.95□□□□□ -0.18
GAFA1Q96PS6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.95□□□□□ -0.18
GAFA1Q96PS6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms