Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.11■□□□□ 0.49
LRCH3Q96II8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH3Q96II8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.11■□□□□ 0.49
LRCH3Q96II8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH3Q96II8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH3Q96II8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
LRCH3Q96II8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH3Q96II8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH3Q96II8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH3Q96II8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 BTBD7P1-201ENST00000447253 1453 ntBASIC18.1■□□□□ 0.49
LRCH3Q96II8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 AC093525.8-201ENST00000624099 1342 ntBASIC18.1■□□□□ 0.49
LRCH3Q96II8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 AC005229.1-201ENST00000392885 409 ntBASIC18.1■□□□□ 0.49
LRCH3Q96II8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH3Q96II8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
LRCH3Q96II8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH3Q96II8 ABALON-201ENST00000629058 1903 ntBASIC18.09■□□□□ 0.49
LRCH3Q96II8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 AC016027.1-202ENST00000607927 1699 ntBASIC18.09■□□□□ 0.49
LRCH3Q96II8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH3Q96II8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.08■□□□□ 0.49
LRCH3Q96II8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
LRCH3Q96II8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRCH3Q96II8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LRCH3Q96II8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LRCH3Q96II8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRCH3Q96II8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.08■□□□□ 0.49
LRCH3Q96II8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 AC055876.2-201ENST00000531834 546 ntBASIC18.08■□□□□ 0.48
LRCH3Q96II8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 AC243960.2-201ENST00000600996 747 ntBASIC18.08■□□□□ 0.48
LRCH3Q96II8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRCH3Q96II8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRCH3Q96II8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms