Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HPS1Q92902 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 AL391807.1-203ENST00000604392 2365 ntBASIC15.48■□□□□ 0.07
HPS1Q92902 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 AC093010.1-201ENST00000473625 1624 ntBASIC15.48■□□□□ 0.07
HPS1Q92902 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 CHCHD2P8-201ENST00000429873 447 ntBASIC15.48■□□□□ 0.07
HPS1Q92902 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.48■□□□□ 0.07
HPS1Q92902 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
HPS1Q92902 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.48■□□□□ 0.07
HPS1Q92902 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
HPS1Q92902 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HPS1Q92902 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 AC092171.3-201ENST00000610122 2651 ntBASIC15.48■□□□□ 0.07
HPS1Q92902 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HPS1Q92902 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.48■□□□□ 0.07
HPS1Q92902 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HPS1Q92902 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HPS1Q92902 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.47■□□□□ 0.07
HPS1Q92902 MTND4LP12-201ENST00000448237 295 ntBASIC15.47■□□□□ 0.07
HPS1Q92902 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.47■□□□□ 0.07
HPS1Q92902 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HPS1Q92902 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 AL365203.3-201ENST00000609742 2057 ntBASIC15.47■□□□□ 0.07
HPS1Q92902 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HPS1Q92902 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.47■□□□□ 0.07
HPS1Q92902 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.46■□□□□ 0.07
HPS1Q92902 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms