Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.92■□□□□ 0.62
USP6NLQ92738 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6NLQ92738 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USP6NLQ92738 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6NLQ92738 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6NLQ92738 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USP6NLQ92738 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
USP6NLQ92738 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6NLQ92738 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6NLQ92738 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
USP6NLQ92738 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
USP6NLQ92738 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 PRYP6-201ENST00000514804 343 ntBASIC18.91■□□□□ 0.62
USP6NLQ92738 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6NLQ92738 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.91■□□□□ 0.62
USP6NLQ92738 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
USP6NLQ92738 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.91■□□□□ 0.62
USP6NLQ92738 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
USP6NLQ92738 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP6NLQ92738 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6NLQ92738 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.91■□□□□ 0.62
USP6NLQ92738 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.91■□□□□ 0.62
USP6NLQ92738 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 AC016396.2-201ENST00000562575 1417 ntBASIC18.91■□□□□ 0.62
USP6NLQ92738 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6NLQ92738 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP6NLQ92738 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP6NLQ92738 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.9■□□□□ 0.62
USP6NLQ92738 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.9■□□□□ 0.62
USP6NLQ92738 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.9■□□□□ 0.62
USP6NLQ92738 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.9■□□□□ 0.62
USP6NLQ92738 AL132655.2-201ENST00000596276 594 ntBASIC18.9■□□□□ 0.62
USP6NLQ92738 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 RN7SL828P-201ENST00000607615 303 ntBASIC18.9■□□□□ 0.62
USP6NLQ92738 AL133215.2-201ENST00000609242 977 ntBASIC18.9■□□□□ 0.62
USP6NLQ92738 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.9■□□□□ 0.62
USP6NLQ92738 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6NLQ92738 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 AC007541.1-201ENST00000570282 1469 ntBASIC18.9■□□□□ 0.62
USP6NLQ92738 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6NLQ92738 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6NLQ92738 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP6NLQ92738 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP6NLQ92738 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP6NLQ92738 CETN4P-206ENST00000642099 2168 ntBASIC18.89■□□□□ 0.62
USP6NLQ92738 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP6NLQ92738 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
USP6NLQ92738 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6NLQ92738 ZNF890P-202ENST00000530367 1156 ntBASIC18.89■□□□□ 0.61
USP6NLQ92738 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.89■□□□□ 0.61
USP6NLQ92738 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.89■□□□□ 0.61
USP6NLQ92738 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.89■□□□□ 0.61
USP6NLQ92738 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms