Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCC2Q8TAQ2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 MRPL20P1-201ENST00000400819 433 ntBASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SLC25A6P2-201ENST00000497974 877 ntBASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 RNA5SP416-201ENST00000516838 111 ntBASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 AC064836.3-201ENST00000607928 673 ntBASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMARCC2Q8TAQ2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCC2Q8TAQ2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCC2Q8TAQ2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms