Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 KRT18P3-201ENST00000451602 1288 ntBASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AL513480.1-201ENST00000451731 511 ntBASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 KRT18P58-201ENST00000527480 1120 ntBASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 AC007064.4-201ENST00000637740 555 ntBASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 NKILA-202ENST00000614771 2598 ntBASIC19.37■□□□□ 0.69
CCDC148Q8NFR7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 MIR4515-201ENST00000584082 81 ntBASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 AC023141.13-201ENST00000604991 943 ntBASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 AL645728.2-201ENST00000641974 660 ntBASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 AL139011.1-202ENST00000642063 584 ntBASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC148Q8NFR7 AC012569.1-201ENST00000591191 1524 ntBASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 AC106886.4-201ENST00000623557 2502 ntBASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC148Q8NFR7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms