Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 NPAP1P7-201ENST00000613027 823 ntBASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 AP005117.1-201ENST00000584346 1413 ntBASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
VPS37AQ8NEZ2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 NCF1C-201ENST00000438382 1427 ntBASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 CYP2T1P-202ENST00000641596 2535 ntBASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS37AQ8NEZ2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 AC006538.1-201ENST00000567905 1585 ntBASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 AL358472.4-201ENST00000633140 710 ntBASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS37AQ8NEZ2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms