Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKL3Q8IVW4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 KRT18P27-201ENST00000427733 1299 ntBASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 RPS2P1-201ENST00000434010 821 ntBASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKL3Q8IVW4 DOC2GP-204ENST00000639052 2548 ntBASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 CYP2T1P-202ENST00000641596 2535 ntBASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AC136632.2-201ENST00000512891 861 ntBASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 MIR4492-201ENST00000581627 80 ntBASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 GGTLC5P-201ENST00000617623 998 ntBASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKL3Q8IVW4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDKL3Q8IVW4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 FER1L4-210ENST00000615531 5998 ntBASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 ALOX12P2-203ENST00000570921 1945 ntBASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 AC073621.1-201ENST00000392730 636 ntBASIC17.26■□□□□ 0.35
CDKL3Q8IVW4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms