Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 AC002310.6-201ENST00000624451 1377 ntBASIC15.57■□□□□ 0.08
VRK2Q86Y07 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VRK2Q86Y07 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.57■□□□□ 0.08
VRK2Q86Y07 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 HLA-J-202ENST00000469281 1241 ntBASIC15.56■□□□□ 0.08
VRK2Q86Y07 KRT18P56-201ENST00000507275 550 ntBASIC15.56■□□□□ 0.08
VRK2Q86Y07 UNC93B7-201ENST00000509439 705 ntBASIC15.56■□□□□ 0.08
VRK2Q86Y07 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.56■□□□□ 0.08
VRK2Q86Y07 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VRK2Q86Y07 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 AC008741.2-201ENST00000612792 3115 ntBASIC15.55■□□□□ 0.08
VRK2Q86Y07 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 LAGE3P1-201ENST00000425356 484 ntBASIC15.55■□□□□ 0.08
VRK2Q86Y07 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 AC107918.4-202ENST00000641623 219 ntBASIC15.55■□□□□ 0.08
VRK2Q86Y07 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms