Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC41PQ6P2S7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.38■□□□□ 0.85
TTC41PQ6P2S7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.38■□□□□ 0.85
TTC41PQ6P2S7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.38■□□□□ 0.85
TTC41PQ6P2S7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 AL513190.1-201ENST00000621254 727 ntBASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TTC41PQ6P2S7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AL009183.1-201ENST00000603760 355 ntBASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 AC092865.6-201ENST00000642101 219 ntBASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC41PQ6P2S7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 PGAM5P1-201ENST00000518923 814 ntBASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 ME2P1-201ENST00000426028 1970 ntBASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC41PQ6P2S7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms