Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 FAM58DP-201ENST00000428076 619 ntBASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 HLA-J-203ENST00000494367 1087 ntBASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 AC109322.1-201ENST00000524499 1264 ntBASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.66■□□□□ 0.58
SWSAP1Q6NVH7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 AL645939.2-201ENST00000427340 991 ntBASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 IGHV3-62-201ENST00000520057 340 ntBASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SWSAP1Q6NVH7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.64■□□□□ 0.58
SWSAP1Q6NVH7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SWSAP1Q6NVH7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SWSAP1Q6NVH7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 AC009093.7-201ENST00000623853 1223 ntBASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 LINC00628-201ENST00000628516 1289 ntBASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 KRT8P39-201ENST00000396270 1433 ntBASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 UXT-AS1-201ENST00000590504 1525 ntBASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SWSAP1Q6NVH7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms