Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KRT39Q6A163 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.15■□□□□ 0.5
KRT39Q6A163 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT39Q6A163 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.15■□□□□ 0.5
KRT39Q6A163 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT39Q6A163 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
KRT39Q6A163 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 AL671710.1-201ENST00000610245 2349 ntBASIC18.15■□□□□ 0.5
KRT39Q6A163 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT39Q6A163 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.14■□□□□ 0.5
KRT39Q6A163 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT39Q6A163 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KRT39Q6A163 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.14■□□□□ 0.49
KRT39Q6A163 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.14■□□□□ 0.49
KRT39Q6A163 MIR4515-201ENST00000584082 81 ntBASIC18.14■□□□□ 0.49
KRT39Q6A163 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT39Q6A163 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.14■□□□□ 0.49
KRT39Q6A163 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT39Q6A163 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
KRT39Q6A163 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.14■□□□□ 0.49
KRT39Q6A163 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
KRT39Q6A163 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT39Q6A163 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT39Q6A163 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 AC012569.1-201ENST00000591191 1524 ntBASIC18.13■□□□□ 0.49
KRT39Q6A163 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.13■□□□□ 0.49
KRT39Q6A163 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
KRT39Q6A163 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KRT39Q6A163 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.13■□□□□ 0.49
KRT39Q6A163 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT39Q6A163 AC096734.2-201ENST00000562054 433 ntBASIC18.13■□□□□ 0.49
KRT39Q6A163 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT39Q6A163 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
KRT39Q6A163 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT39Q6A163 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT39Q6A163 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT39Q6A163 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT39Q6A163 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT39Q6A163 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
KRT39Q6A163 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT39Q6A163 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT39Q6A163 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT39Q6A163 AC120114.3-201ENST00000611923 658 ntBASIC18.12■□□□□ 0.49
KRT39Q6A163 AC010507.1-201ENST00000633895 436 ntBASIC18.12■□□□□ 0.49
KRT39Q6A163 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT39Q6A163 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT39Q6A163 AL118508.1-201ENST00000613502 2345 ntBASIC18.12■□□□□ 0.49
KRT39Q6A163 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KRT39Q6A163 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT39Q6A163 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT39Q6A163 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT39Q6A163 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT39Q6A163 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT39Q6A163 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
KRT39Q6A163 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT39Q6A163 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT39Q6A163 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms