Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 KRT8P10-201ENST00000450021 1447 ntBASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 PMPCAP1-201ENST00000508114 1576 ntBASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 AC132008.2-207ENST00000454517 770 ntBASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 AC105917.1-201ENST00000506637 2539 ntBASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATPAF1Q5TC12 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 AC106795.1-205ENST00000512851 1056 ntBASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 STK25P1-201ENST00000585406 838 ntBASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 AC093525.9-201ENST00000624961 1746 ntBASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ATPAF1Q5TC12 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.65□□□□□ -0.07
ATPAF1Q5TC12 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms