Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRK2Q5S007 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 AC091804.1-201ENST00000486888 567 ntBASIC14.38□□□□□ -0.11
LRRK2Q5S007 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 CYP2A7P1-201ENST00000595391 815 ntBASIC14.38□□□□□ -0.11
LRRK2Q5S007 AC021097.1-201ENST00000607902 574 ntBASIC14.38□□□□□ -0.11
LRRK2Q5S007 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SPDYE17-201ENST00000412399 783 ntBASIC14.38□□□□□ -0.11
LRRK2Q5S007 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 MIR4492-201ENST00000581627 80 ntBASIC14.38□□□□□ -0.11
LRRK2Q5S007 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRK2Q5S007 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.38□□□□□ -0.11
LRRK2Q5S007 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRK2Q5S007 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 DUX4L45-201ENST00000566406 1057 ntBASIC14.37□□□□□ -0.11
LRRK2Q5S007 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 TDH-203ENST00000531764 1110 ntBASIC14.37□□□□□ -0.11
LRRK2Q5S007 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.37□□□□□ -0.11
LRRK2Q5S007 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRK2Q5S007 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRK2Q5S007 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LRRK2Q5S007 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms