Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 IGHV3-65-201ENST00000523210 341 ntBASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 AC002310.6-201ENST00000624451 1377 ntBASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HERC4Q5GLZ8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 HLA-J-203ENST00000494367 1087 ntBASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 SLC25A6P2-201ENST00000497974 877 ntBASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 YBX1P5-201ENST00000509441 847 ntBASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 AC084018.2-201ENST00000613093 2607 ntBASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 AC099398.1-201ENST00000567919 2776 ntBASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC4Q5GLZ8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AC254562.1-201ENST00000417586 456 ntBASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 COX20P2-201ENST00000452636 358 ntBASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AP002490.2-201ENST00000524791 560 ntBASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AC005829.1-201ENST00000570002 483 ntBASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AC011467.4-201ENST00000594891 528 ntBASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC4Q5GLZ8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms