Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 AC099522.2-201ENST00000607001 744 ntBASIC21.8■■□□□ 1.08
CCDC27Q2M243 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC27Q2M243 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC27Q2M243 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC27Q2M243 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC27Q2M243 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 PCDHA14-201ENST00000506751 2298 ntBASIC21.79■■□□□ 1.08
CCDC27Q2M243 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC27Q2M243 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC27Q2M243 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 AC002056.1-201ENST00000395613 760 ntBASIC21.78■■□□□ 1.08
CCDC27Q2M243 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 AC020765.3-201ENST00000613051 740 ntBASIC21.78■■□□□ 1.08
CCDC27Q2M243 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC27Q2M243 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC27Q2M243 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC27Q2M243 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC27Q2M243 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.77■■□□□ 1.07
CCDC27Q2M243 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC27Q2M243 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC27Q2M243 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.77■■□□□ 1.07
CCDC27Q2M243 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC27Q2M243 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC27Q2M243 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CCDC27Q2M243 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC27Q2M243 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC27Q2M243 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC27Q2M243 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC27Q2M243 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC27Q2M243 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CCDC27Q2M243 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC27Q2M243 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms