Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL033527.5-201ENST00000641382 801 ntBASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 AC005229.1-201ENST00000392885 409 ntBASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 AC099336.1-201ENST00000417053 1171 ntBASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 GPAA1P2-201ENST00000417923 928 ntBASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 AC098850.1-201ENST00000419919 790 ntBASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 RNA5SP412-201ENST00000516234 123 ntBASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RSPO4Q2I0M5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 PDIA3P1-201ENST00000471856 1510 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 FAM21FP-201ENST00000426241 1131 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC114501.2-201ENST00000439631 535 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC023310.3-201ENST00000557027 670 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC100756.1-201ENST00000562736 682 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC138749.3-201ENST00000567691 622 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC106872.11-201ENST00000605838 421 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC093726.1-201ENST00000608064 963 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC116165.1-201ENST00000611806 668 ntBASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO4Q2I0M5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RSPO4Q2I0M5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.14■□□□□ 0.18
RSPO4Q2I0M5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RSPO4Q2I0M5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RSPO4Q2I0M5 AC018665.1-201ENST00000622927 1362 ntBASIC16.14■□□□□ 0.17
RSPO4Q2I0M5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RSPO4Q2I0M5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RSPO4Q2I0M5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms