Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.92■□□□□ 0.62
TPM4P67936 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TPM4P67936 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.92■□□□□ 0.62
TPM4P67936 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM4P67936 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM4P67936 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TPM4P67936 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 AC113347.1-201ENST00000413321 391 ntBASIC18.91■□□□□ 0.62
TPM4P67936 RN7SL606P-201ENST00000472779 293 ntBASIC18.91■□□□□ 0.62
TPM4P67936 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM4P67936 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
TPM4P67936 AC005336.2-201ENST00000593183 939 ntBASIC18.91■□□□□ 0.62
TPM4P67936 AL353801.3-201ENST00000609898 542 ntBASIC18.91■□□□□ 0.62
TPM4P67936 AC005363.2-201ENST00000618631 242 ntBASIC18.91■□□□□ 0.62
TPM4P67936 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM4P67936 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.91■□□□□ 0.62
TPM4P67936 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM4P67936 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM4P67936 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM4P67936 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.9■□□□□ 0.62
TPM4P67936 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM4P67936 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 AC090616.6-201ENST00000582640 721 ntBASIC18.9■□□□□ 0.62
TPM4P67936 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM4P67936 IGHV3-41-201ENST00000613121 348 ntBASIC18.9■□□□□ 0.62
TPM4P67936 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TPM4P67936 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TPM4P67936 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM4P67936 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TPM4P67936 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM4P67936 ME2P1-201ENST00000426028 1970 ntBASIC18.9■□□□□ 0.62
TPM4P67936 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TPM4P67936 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM4P67936 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
TPM4P67936 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TPM4P67936 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TPM4P67936 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 AC132938.5-201ENST00000624980 1813 ntBASIC18.89■□□□□ 0.61
TPM4P67936 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.89■□□□□ 0.61
TPM4P67936 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM4P67936 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.89■□□□□ 0.61
TPM4P67936 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TPM4P67936 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.89■□□□□ 0.61
TPM4P67936 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.89■□□□□ 0.61
TPM4P67936 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms