Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN2P57739 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN2P57739 CNN2P2-201ENST00000443536 909 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 CNN2P3-201ENST00000450201 906 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN2P57739 KRT8P23-201ENST00000560090 1207 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 SPCS2P1-201ENST00000561636 679 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 AC026150.2-201ENST00000564693 1156 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 MIR3909-201ENST00000579518 119 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 MIR3197-201ENST00000582241 73 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 AL390955.2-201ENST00000603032 514 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 AL136317.3-201ENST00000618497 906 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 AP001059.3-201ENST00000619053 235 ntBASIC16.55■□□□□ 0.24
CLDN2P57739 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN2P57739 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CLDN2P57739 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN2P57739 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CLDN2P57739 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLDN2P57739 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN2P57739 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CLDN2P57739 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLDN2P57739 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CLDN2P57739 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN2P57739 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN2P57739 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN2P57739 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 BCRP1-201ENST00000444246 691 ntBASIC16.54■□□□□ 0.24
CLDN2P57739 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.54■□□□□ 0.24
CLDN2P57739 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN2P57739 AC069262.1-201ENST00000539058 672 ntBASIC16.54■□□□□ 0.24
CLDN2P57739 AC124947.2-201ENST00000547118 1133 ntBASIC16.54■□□□□ 0.24
CLDN2P57739 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN2P57739 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN2P57739 AC008267.7-201ENST00000624570 1194 ntBASIC16.54■□□□□ 0.24
CLDN2P57739 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CLDN2P57739 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLDN2P57739 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CLDN2P57739 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN2P57739 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN2P57739 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN2P57739 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN2P57739 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN2P57739 AL671710.1-201ENST00000610245 2349 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CLDN2P57739 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.53■□□□□ 0.24
CLDN2P57739 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN2P57739 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN2P57739 TUBB3P1-201ENST00000405796 1332 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLDN2P57739 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN2P57739 AC008677.1-201ENST00000519230 1561 ntBASIC16.53■□□□□ 0.24
CLDN2P57739 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms