Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
AP1S2P56377 AL118508.1-201ENST00000613502 2345 ntBASIC16.39■□□□□ 0.21
AP1S2P56377 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S2P56377 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S2P56377 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 AC098831.1-202ENST00000438821 336 ntBASIC16.38■□□□□ 0.21
AP1S2P56377 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
AP1S2P56377 AC108751.1-201ENST00000490852 363 ntBASIC16.38■□□□□ 0.21
AP1S2P56377 AC087641.1-201ENST00000557561 1021 ntBASIC16.38■□□□□ 0.21
AP1S2P56377 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.38■□□□□ 0.21
AP1S2P56377 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
AP1S2P56377 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 AC004790.2-201ENST00000623588 572 ntBASIC16.38■□□□□ 0.21
AP1S2P56377 AC116407.3-201ENST00000623905 1129 ntBASIC16.38■□□□□ 0.21
AP1S2P56377 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.38■□□□□ 0.21
AP1S2P56377 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.38■□□□□ 0.21
AP1S2P56377 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
AP1S2P56377 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP1S2P56377 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
AP1S2P56377 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 SLC22A20-204ENST00000530038 1673 ntBASIC16.37■□□□□ 0.21
AP1S2P56377 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.37■□□□□ 0.21
AP1S2P56377 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S2P56377 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
AP1S2P56377 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 PMS2P1-201ENST00000431037 1228 ntBASIC16.37■□□□□ 0.21
AP1S2P56377 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.37■□□□□ 0.21
AP1S2P56377 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 OR7E47P-204ENST00000575924 449 ntBASIC16.37■□□□□ 0.21
AP1S2P56377 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.37■□□□□ 0.21
AP1S2P56377 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S2P56377 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
AP1S2P56377 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S2P56377 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S2P56377 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S2P56377 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
AP1S2P56377 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 KRT8P39-201ENST00000396270 1433 ntBASIC16.36■□□□□ 0.21
AP1S2P56377 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S2P56377 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms