Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 AC067863.1-201ENST00000494933 530 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 AC109322.1-201ENST00000524499 1264 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 AL512356.2-201ENST00000546955 174 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 LINC01225-203ENST00000563550 1244 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.16■□□□□ 0.18
EPHA4P54764 AC013467.2-201ENST00000605472 835 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 AC106028.4-201ENST00000614509 607 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 AC008267.7-201ENST00000624570 1194 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA4P54764 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.16■□□□□ 0.18
EPHA4P54764 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
EPHA4P54764 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
EPHA4P54764 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EPHA4P54764 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EPHA4P54764 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.16■□□□□ 0.18
EPHA4P54764 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.15■□□□□ 0.18
EPHA4P54764 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 AC120057.1-201ENST00000483947 663 ntBASIC16.15■□□□□ 0.18
EPHA4P54764 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.15■□□□□ 0.18
EPHA4P54764 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.15■□□□□ 0.18
EPHA4P54764 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.15■□□□□ 0.18
EPHA4P54764 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHA4P54764 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EPHA4P54764 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
EPHA4P54764 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
EPHA4P54764 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA4P54764 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
EPHA4P54764 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA4P54764 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA4P54764 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA4P54764 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHA4P54764 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHA4P54764 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHA4P54764 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHA4P54764 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
EPHA4P54764 CNN2P2-201ENST00000443536 909 ntBASIC16.14■□□□□ 0.17
EPHA4P54764 FAM86GP-201ENST00000448322 971 ntBASIC16.14■□□□□ 0.17
EPHA4P54764 CNN2P3-201ENST00000450201 906 ntBASIC16.14■□□□□ 0.17
EPHA4P54764 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA4P54764 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.14■□□□□ 0.17
EPHA4P54764 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
EPHA4P54764 AL136317.3-201ENST00000618497 906 ntBASIC16.14■□□□□ 0.17
EPHA4P54764 AP001059.3-201ENST00000619053 235 ntBASIC16.14■□□□□ 0.17
EPHA4P54764 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHA4P54764 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
EPHA4P54764 LINC00895-201ENST00000629028 1637 ntBASIC16.14■□□□□ 0.17
EPHA4P54764 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
EPHA4P54764 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.14■□□□□ 0.17
EPHA4P54764 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms