Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.86□□□□□ -0.03
CCR9P51686 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.86□□□□□ -0.03
CCR9P51686 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCR9P51686 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
CCR9P51686 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.86□□□□□ -0.03
CCR9P51686 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCR9P51686 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 AC148477.5-201ENST00000625164 1645 ntBASIC14.85□□□□□ -0.03
CCR9P51686 KRT8P49-201ENST00000604166 1432 ntBASIC14.85□□□□□ -0.03
CCR9P51686 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.85□□□□□ -0.03
CCR9P51686 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCR9P51686 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.85□□□□□ -0.03
CCR9P51686 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.85□□□□□ -0.03
CCR9P51686 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CCR9P51686 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCR9P51686 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCR9P51686 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCR9P51686 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCR9P51686 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCR9P51686 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.84□□□□□ -0.03
CCR9P51686 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCR9P51686 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
CCR9P51686 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.84□□□□□ -0.03
CCR9P51686 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.84□□□□□ -0.03
CCR9P51686 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CCR9P51686 DRAXINP1-201ENST00000437611 948 ntBASIC14.84□□□□□ -0.03
CCR9P51686 MINOS1P3-201ENST00000457048 203 ntBASIC14.84□□□□□ -0.03
CCR9P51686 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 BNIP3P18-201ENST00000593976 575 ntBASIC14.84□□□□□ -0.03
CCR9P51686 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCR9P51686 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.84□□□□□ -0.03
CCR9P51686 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CCR9P51686 AC023824.1-201ENST00000562945 2975 ntBASIC14.84□□□□□ -0.03
CCR9P51686 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCR9P51686 AC097637.2-201ENST00000624096 1997 ntBASIC14.84□□□□□ -0.03
CCR9P51686 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCR9P51686 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCR9P51686 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.83□□□□□ -0.03
CCR9P51686 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCR9P51686 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.83□□□□□ -0.03
CCR9P51686 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCR9P51686 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.83□□□□□ -0.03
CCR9P51686 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CCR9P51686 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.83□□□□□ -0.04
CCR9P51686 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCR9P51686 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCR9P51686 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCR9P51686 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.83□□□□□ -0.04
CCR9P51686 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCR9P51686 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCR9P51686 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms