Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 BX842568.4-201ENST00000421222 227 ntBASIC18.2■□□□□ 0.5
PDE6CP51160 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.2■□□□□ 0.5
PDE6CP51160 KRT18P3-201ENST00000451602 1288 ntBASIC18.2■□□□□ 0.5
PDE6CP51160 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.2■□□□□ 0.5
PDE6CP51160 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE6CP51160 DUX4L17-201ENST00000557360 1267 ntBASIC18.2■□□□□ 0.5
PDE6CP51160 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PDE6CP51160 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6CP51160 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6CP51160 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 PCDHA14-201ENST00000506751 2298 ntBASIC18.19■□□□□ 0.5
PDE6CP51160 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDE6CP51160 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.19■□□□□ 0.5
PDE6CP51160 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PDE6CP51160 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 AC009947.1-201ENST00000444350 727 ntBASIC18.19■□□□□ 0.5
PDE6CP51160 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PDE6CP51160 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 AC092865.5-201ENST00000545435 363 ntBASIC18.19■□□□□ 0.5
PDE6CP51160 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.19■□□□□ 0.5
PDE6CP51160 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDE6CP51160 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6CP51160 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 AC108751.1-201ENST00000490852 363 ntBASIC18.18■□□□□ 0.5
PDE6CP51160 AC040169.1-201ENST00000565382 521 ntBASIC18.18■□□□□ 0.5
PDE6CP51160 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6CP51160 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6CP51160 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6CP51160 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms