Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.96■□□□□ 0.47
PSEN1P49768 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PSEN1P49768 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PSEN1P49768 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PSEN1P49768 ELOCP6-201ENST00000429066 328 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 VN2R19P-201ENST00000442399 1052 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 PAWRP1-201ENST00000451083 565 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.96■□□□□ 0.47
PSEN1P49768 ELOCP12-201ENST00000458706 328 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.96■□□□□ 0.47
PSEN1P49768 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PSEN1P49768 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.96■□□□□ 0.47
PSEN1P49768 MIR4751-201ENST00000578027 74 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.96■□□□□ 0.47
PSEN1P49768 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.96■□□□□ 0.47
PSEN1P49768 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.96■□□□□ 0.47
PSEN1P49768 AL512356.3-201ENST00000623005 461 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 AC004790.2-201ENST00000623588 572 ntBASIC17.96■□□□□ 0.47
PSEN1P49768 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PSEN1P49768 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PSEN1P49768 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.96■□□□□ 0.47
PSEN1P49768 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSEN1P49768 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PSEN1P49768 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
PSEN1P49768 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
PSEN1P49768 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.95■□□□□ 0.46
PSEN1P49768 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC17.95■□□□□ 0.46
PSEN1P49768 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.95■□□□□ 0.46
PSEN1P49768 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.95■□□□□ 0.46
PSEN1P49768 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.95■□□□□ 0.46
PSEN1P49768 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.95■□□□□ 0.46
PSEN1P49768 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PSEN1P49768 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.95■□□□□ 0.46
PSEN1P49768 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSEN1P49768 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.95■□□□□ 0.46
PSEN1P49768 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
PSEN1P49768 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PSEN1P49768 AC008741.2-201ENST00000612792 3115 ntBASIC17.94■□□□□ 0.46
PSEN1P49768 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
PSEN1P49768 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 PCDHB19P-201ENST00000570871 2371 ntBASIC17.94■□□□□ 0.46
PSEN1P49768 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.94■□□□□ 0.46
PSEN1P49768 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PSEN1P49768 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
PSEN1P49768 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PSEN1P49768 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.94■□□□□ 0.46
PSEN1P49768 POLD2P1-201ENST00000511220 997 ntBASIC17.94■□□□□ 0.46
PSEN1P49768 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
PSEN1P49768 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.94■□□□□ 0.46
PSEN1P49768 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC17.94■□□□□ 0.46
PSEN1P49768 AC064836.3-201ENST00000607928 673 ntBASIC17.94■□□□□ 0.46
PSEN1P49768 AC009118.3-201ENST00000622896 873 ntBASIC17.94■□□□□ 0.46
PSEN1P49768 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.94■□□□□ 0.46
PSEN1P49768 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PSEN1P49768 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.94■□□□□ 0.46
PSEN1P49768 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.94■□□□□ 0.46
PSEN1P49768 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSEN1P49768 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms