Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-1P43699 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-1P43699 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-1P43699 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NKX2-1P43699 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-1P43699 AC092384.3-202ENST00000564646 2873 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-1P43699 CYP2D8P-201ENST00000433633 1490 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 TSPY15P-201ENST00000457163 923 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.83□□□□□ -0.2
NKX2-1P43699 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.83□□□□□ -0.2
NKX2-1P43699 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
NKX2-1P43699 GPR32P1-201ENST00000601788 811 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 AC010947.1-201ENST00000623454 693 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 AC141257.4-201ENST00000634557 245 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 AC136944.6-201ENST00000634818 245 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
NKX2-1P43699 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
NKX2-1P43699 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NKX2-1P43699 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 AL161772.1-201ENST00000610494 4412 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.83□□□□□ -0.2
NKX2-1P43699 AL049757.1-201ENST00000616842 1596 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 DBET-201ENST00000630918 3363 ntBASIC13.83□□□□□ -0.2
NKX2-1P43699 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.83□□□□□ -0.2
NKX2-1P43699 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NKX2-1P43699 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.82□□□□□ -0.2
NKX2-1P43699 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-1P43699 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NKX2-1P43699 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
NKX2-1P43699 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-1P43699 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NKX2-1P43699 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-1P43699 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-1P43699 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 AC122714.2-201ENST00000502787 707 ntBASIC13.82□□□□□ -0.2
NKX2-1P43699 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-1P43699 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NKX2-1P43699 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NKX2-1P43699 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.82□□□□□ -0.2
NKX2-1P43699 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-1P43699 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms