Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.59■□□□□ 0.57
HTTP42858 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTTP42858 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTTP42858 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.59■□□□□ 0.57
HTTP42858 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTTP42858 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTTP42858 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.58■□□□□ 0.57
HTTP42858 CALR4P-201ENST00000431943 946 ntBASIC18.58■□□□□ 0.57
HTTP42858 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.58■□□□□ 0.57
HTTP42858 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.58■□□□□ 0.57
HTTP42858 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.58■□□□□ 0.57
HTTP42858 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.58■□□□□ 0.57
HTTP42858 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HTTP42858 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.58■□□□□ 0.57
HTTP42858 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTTP42858 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
HTTP42858 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.58■□□□□ 0.56
HTTP42858 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.58■□□□□ 0.56
HTTP42858 AC025048.3-201ENST00000590609 569 ntBASIC18.58■□□□□ 0.56
HTTP42858 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.58■□□□□ 0.56
HTTP42858 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.58■□□□□ 0.56
HTTP42858 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.58■□□□□ 0.56
HTTP42858 AC006538.1-201ENST00000567905 1585 ntBASIC18.58■□□□□ 0.56
HTTP42858 MSTO2P-201ENST00000314835 1709 ntBASIC18.58■□□□□ 0.56
HTTP42858 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.58■□□□□ 0.56
HTTP42858 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.58■□□□□ 0.56
HTTP42858 MPDU1-223ENST00000582151 728 ntBASIC18.58■□□□□ 0.56
HTTP42858 AC009542.2-202ENST00000619004 1067 ntBASIC18.58■□□□□ 0.56
HTTP42858 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HTTP42858 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTTP42858 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.57■□□□□ 0.56
HTTP42858 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.57■□□□□ 0.56
HTTP42858 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
HTTP42858 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.57■□□□□ 0.56
HTTP42858 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.57■□□□□ 0.56
HTTP42858 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.57■□□□□ 0.56
HTTP42858 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HTTP42858 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HTTP42858 AC087289.5-201ENST00000586076 3175 ntBASIC18.57■□□□□ 0.56
HTTP42858 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.57■□□□□ 0.56
HTTP42858 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HTTP42858 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.57■□□□□ 0.56
HTTP42858 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.57■□□□□ 0.56
HTTP42858 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.57■□□□□ 0.56
HTTP42858 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HTTP42858 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.57■□□□□ 0.56
HTTP42858 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HTTP42858 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.56■□□□□ 0.56
HTTP42858 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 SLC25A1P3-201ENST00000395415 828 ntBASIC18.56■□□□□ 0.56
HTTP42858 KRT8P13-201ENST00000463294 1010 ntBASIC18.56■□□□□ 0.56
HTTP42858 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.56■□□□□ 0.56
HTTP42858 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.56■□□□□ 0.56
HTTP42858 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.56■□□□□ 0.56
HTTP42858 BOLA2P3-201ENST00000404566 256 ntBASIC18.56■□□□□ 0.56
HTTP42858 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HTTP42858 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 FRMD8P1-201ENST00000440433 1524 ntBASIC18.56■□□□□ 0.56
HTTP42858 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.56■□□□□ 0.56
HTTP42858 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HTTP42858 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HTTP42858 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.56■□□□□ 0.56
HTTP42858 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.56■□□□□ 0.56
HTTP42858 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.56■□□□□ 0.56
HTTP42858 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.56■□□□□ 0.56
HTTP42858 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.56■□□□□ 0.56
HTTP42858 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms