Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.96■□□□□ 0.15
RORAP35398 AC124067.4-201ENST00000519691 2379 ntBASIC15.96■□□□□ 0.15
RORAP35398 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 HCG4-201ENST00000418983 998 ntBASIC15.96■□□□□ 0.15
RORAP35398 AL645939.2-201ENST00000427340 991 ntBASIC15.96■□□□□ 0.15
RORAP35398 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.96■□□□□ 0.15
RORAP35398 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.96■□□□□ 0.15
RORAP35398 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RORAP35398 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.96■□□□□ 0.15
RORAP35398 AC124947.2-201ENST00000547118 1133 ntBASIC15.96■□□□□ 0.15
RORAP35398 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RORAP35398 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.96■□□□□ 0.15
RORAP35398 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.96■□□□□ 0.15
RORAP35398 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RORAP35398 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RORAP35398 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.96■□□□□ 0.15
RORAP35398 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RORAP35398 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RORAP35398 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.96■□□□□ 0.15
RORAP35398 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RORAP35398 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RORAP35398 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RORAP35398 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RORAP35398 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RORAP35398 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RORAP35398 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.95■□□□□ 0.14
RORAP35398 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.95■□□□□ 0.14
RORAP35398 TIMM8BP1-201ENST00000452384 211 ntBASIC15.95■□□□□ 0.14
RORAP35398 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 AC023141.5-201ENST00000458585 616 ntBASIC15.95■□□□□ 0.14
RORAP35398 KRT8P48-201ENST00000515599 1220 ntBASIC15.95■□□□□ 0.14
RORAP35398 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.95■□□□□ 0.14
RORAP35398 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 AC091167.2-201ENST00000579581 588 ntBASIC15.95■□□□□ 0.14
RORAP35398 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.95■□□□□ 0.14
RORAP35398 AL009183.1-201ENST00000603760 355 ntBASIC15.95■□□□□ 0.14
RORAP35398 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.95■□□□□ 0.14
RORAP35398 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 SLC22A20-204ENST00000530038 1673 ntBASIC15.95■□□□□ 0.14
RORAP35398 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RORAP35398 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
RORAP35398 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RORAP35398 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.94■□□□□ 0.14
RORAP35398 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RORAP35398 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.94■□□□□ 0.14
RORAP35398 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.94■□□□□ 0.14
RORAP35398 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.94■□□□□ 0.14
RORAP35398 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.94■□□□□ 0.14
RORAP35398 HLA-J-203ENST00000494367 1087 ntBASIC15.94■□□□□ 0.14
RORAP35398 AC109635.5-201ENST00000533593 962 ntBASIC15.94■□□□□ 0.14
RORAP35398 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 AC093520.2-201ENST00000561830 333 ntBASIC15.94■□□□□ 0.14
RORAP35398 RARRES2P8-201ENST00000566335 367 ntBASIC15.94■□□□□ 0.14
RORAP35398 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
RORAP35398 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms