Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BTBD7P1-201ENST00000447253 1453 ntBASIC18.14■□□□□ 0.49
HOXC8P31273 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HOXC8P31273 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.13■□□□□ 0.49
HOXC8P31273 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC8P31273 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 AC020765.3-201ENST00000613051 740 ntBASIC18.13■□□□□ 0.49
HOXC8P31273 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.13■□□□□ 0.49
HOXC8P31273 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HOXC8P31273 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HOXC8P31273 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC8P31273 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.13■□□□□ 0.49
HOXC8P31273 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HOXC8P31273 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC8P31273 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 GPAA1P2-202ENST00000606848 1787 ntBASIC18.12■□□□□ 0.49
HOXC8P31273 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC8P31273 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.12■□□□□ 0.49
HOXC8P31273 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 SPDYE17-201ENST00000412399 783 ntBASIC18.12■□□□□ 0.49
HOXC8P31273 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HOXC8P31273 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 API5-211ENST00000534695 560 ntTSL 5 BASIC18.12■□□□□ 0.49
HOXC8P31273 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 AC010336.2-201ENST00000564226 506 ntBASIC18.12■□□□□ 0.49
HOXC8P31273 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.12■□□□□ 0.49
HOXC8P31273 AC004233.3-201ENST00000607794 1269 ntBASIC18.12■□□□□ 0.49
HOXC8P31273 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC8P31273 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC8P31273 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HOXC8P31273 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC8P31273 GGT4P-201ENST00000623672 1708 ntBASIC18.12■□□□□ 0.49
HOXC8P31273 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HOXC8P31273 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 AL031731.1-201ENST00000642131 2094 ntBASIC18.11■□□□□ 0.49
HOXC8P31273 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HOXC8P31273 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC8P31273 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HOXC8P31273 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC8P31273 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXC8P31273 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.11■□□□□ 0.49
HOXC8P31273 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms