Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXA6P31267 KRT8P39-201ENST00000396270 1433 ntBASIC16.41■□□□□ 0.22
HOXA6P31267 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.41■□□□□ 0.22
HOXA6P31267 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
HOXA6P31267 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXA6P31267 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXA6P31267 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXA6P31267 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXA6P31267 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HOXA6P31267 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HOXA6P31267 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXA6P31267 AC006277.1-201ENST00000624348 1610 ntBASIC16.41■□□□□ 0.22
HOXA6P31267 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXA6P31267 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXA6P31267 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
HOXA6P31267 BOLA2P3-201ENST00000404566 256 ntBASIC16.4■□□□□ 0.22
HOXA6P31267 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXA6P31267 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXA6P31267 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXA6P31267 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
HOXA6P31267 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXA6P31267 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.4■□□□□ 0.22
HOXA6P31267 TMEM261P1-201ENST00000604899 340 ntBASIC16.4■□□□□ 0.22
HOXA6P31267 AL606495.2-201ENST00000605867 535 ntBASIC16.4■□□□□ 0.22
HOXA6P31267 MIR6069-201ENST00000620069 79 ntBASIC16.4■□□□□ 0.22
HOXA6P31267 AC004461.2-201ENST00000629517 803 ntBASIC16.4■□□□□ 0.22
HOXA6P31267 COX11-210ENST00000639671 696 ntBASIC16.4■□□□□ 0.22
HOXA6P31267 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXA6P31267 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXA6P31267 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HOXA6P31267 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HOXA6P31267 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
HOXA6P31267 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
HOXA6P31267 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXA6P31267 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXA6P31267 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.39■□□□□ 0.21
HOXA6P31267 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.39■□□□□ 0.21
HOXA6P31267 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.39■□□□□ 0.21
HOXA6P31267 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.39■□□□□ 0.21
HOXA6P31267 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 AC119751.2-201ENST00000504529 210 ntBASIC16.39■□□□□ 0.21
HOXA6P31267 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.39■□□□□ 0.21
HOXA6P31267 AC123567.1-201ENST00000548294 1261 ntBASIC16.39■□□□□ 0.21
HOXA6P31267 AC092337.1-201ENST00000568699 1129 ntBASIC16.39■□□□□ 0.21
HOXA6P31267 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HOXA6P31267 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HOXA6P31267 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HOXA6P31267 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXA6P31267 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms