Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB4P30926 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.9□□□□□ -0.02
CHRNB4P30926 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 TERF1P3-201ENST00000505638 1227 ntBASIC14.9□□□□□ -0.02
CHRNB4P30926 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB4P30926 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CHRNB4P30926 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.9□□□□□ -0.02
CHRNB4P30926 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB4P30926 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHRNB4P30926 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB4P30926 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNB4P30926 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 WASH6P-202ENST00000359512 1437 ntBASIC14.9□□□□□ -0.02
CHRNB4P30926 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNB4P30926 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNB4P30926 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNB4P30926 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 AC099398.1-201ENST00000567919 2776 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 AC087641.1-201ENST00000557561 1021 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.89□□□□□ -0.03
CHRNB4P30926 LINC01225-203ENST00000563550 1244 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 AC026150.2-201ENST00000564693 1156 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 AC084121.4-201ENST00000641598 221 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 AF228730.8-201ENST00000642140 221 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB4P30926 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB4P30926 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB4P30926 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB4P30926 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB4P30926 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB4P30926 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB4P30926 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 TNRC18P3-201ENST00000441896 2691 ntBASIC14.89□□□□□ -0.03
CHRNB4P30926 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNB4P30926 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB4P30926 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNB4P30926 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB4P30926 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CHRNB4P30926 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNB4P30926 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB4P30926 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB4P30926 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB4P30926 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNB4P30926 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms