Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARSP26640 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VARSP26640 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
VARSP26640 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARSP26640 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VARSP26640 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.61■□□□□ 0.25
VARSP26640 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.61■□□□□ 0.25
VARSP26640 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.61■□□□□ 0.25
VARSP26640 AL022326.1-202ENST00000641533 845 ntBASIC16.61■□□□□ 0.25
VARSP26640 PCDHB17P-201ENST00000539533 2393 ntBASIC16.61■□□□□ 0.25
VARSP26640 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.61■□□□□ 0.25
VARSP26640 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.61■□□□□ 0.25
VARSP26640 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARSP26640 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARSP26640 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VARSP26640 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
VARSP26640 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.6■□□□□ 0.25
VARSP26640 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.6■□□□□ 0.25
VARSP26640 AC139887.3-201ENST00000568585 713 ntBASIC16.6■□□□□ 0.25
VARSP26640 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.6■□□□□ 0.25
VARSP26640 AL139288.1-201ENST00000623748 933 ntBASIC16.6■□□□□ 0.25
VARSP26640 TP73-AS1-207ENST00000624167 988 ntBASIC16.6■□□□□ 0.25
VARSP26640 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
VARSP26640 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 AC092068.3-201ENST00000587894 2016 ntBASIC16.6■□□□□ 0.25
VARSP26640 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
VARSP26640 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARSP26640 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
VARSP26640 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
VARSP26640 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.59■□□□□ 0.25
VARSP26640 BX842568.4-201ENST00000421222 227 ntBASIC16.59■□□□□ 0.25
VARSP26640 ACTG1P4-201ENST00000425123 1122 ntBASIC16.59■□□□□ 0.25
VARSP26640 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.59■□□□□ 0.25
VARSP26640 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.59■□□□□ 0.25
VARSP26640 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.59■□□□□ 0.25
VARSP26640 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VARSP26640 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.59■□□□□ 0.25
VARSP26640 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
VARSP26640 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.59■□□□□ 0.25
VARSP26640 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VARSP26640 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARSP26640 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.58■□□□□ 0.25
VARSP26640 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.58■□□□□ 0.25
VARSP26640 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.58■□□□□ 0.25
VARSP26640 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARSP26640 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VARSP26640 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms