Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.14■□□□□ 0.34
PTPN3P26045 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PTPN3P26045 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
PTPN3P26045 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN3P26045 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTPN3P26045 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN3P26045 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTPN3P26045 AC108751.1-201ENST00000490852 363 ntBASIC17.14■□□□□ 0.33
PTPN3P26045 AL662844.1-201ENST00000546340 181 ntBASIC17.14■□□□□ 0.33
PTPN3P26045 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN3P26045 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.14■□□□□ 0.33
PTPN3P26045 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTPN3P26045 AC005412.3-201ENST00000580309 715 ntBASIC17.14■□□□□ 0.33
PTPN3P26045 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PTPN3P26045 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN3P26045 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTPN3P26045 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN3P26045 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN3P26045 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PTPN3P26045 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 AC079328.2-201ENST00000561241 3354 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
PTPN3P26045 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
PTPN3P26045 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN3P26045 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 CYP2A7P1-201ENST00000595391 815 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 AC010654.1-201ENST00000615722 808 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 HLA-A-201ENST00000376802 1334 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN3P26045 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN3P26045 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 AL512652.2-201ENST00000625156 1716 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 KRT8P39-201ENST00000396270 1433 ntBASIC17.13■□□□□ 0.33
PTPN3P26045 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PTPN3P26045 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN3P26045 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PTPN3P26045 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PTPN3P26045 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN3P26045 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN3P26045 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN3P26045 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 UNC93B6-202ENST00000528242 690 ntBASIC17.12■□□□□ 0.33
PTPN3P26045 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.12■□□□□ 0.33
PTPN3P26045 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms