Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
NCK1P16333 AC083849.1-201ENST00000615227 514 ntBASIC15.95■□□□□ 0.14
NCK1P16333 AC073592.5-201ENST00000624854 528 ntBASIC15.95■□□□□ 0.14
NCK1P16333 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NCK1P16333 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NCK1P16333 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.95■□□□□ 0.14
NCK1P16333 AL513477.1-201ENST00000602865 2407 ntBASIC15.95■□□□□ 0.14
NCK1P16333 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NCK1P16333 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.94■□□□□ 0.14
NCK1P16333 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 AC023824.1-201ENST00000562945 2975 ntBASIC15.94■□□□□ 0.14
NCK1P16333 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 RNF152P1-201ENST00000397754 604 ntBASIC15.94■□□□□ 0.14
NCK1P16333 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.94■□□□□ 0.14
NCK1P16333 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.94■□□□□ 0.14
NCK1P16333 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.94■□□□□ 0.14
NCK1P16333 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.94■□□□□ 0.14
NCK1P16333 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.94■□□□□ 0.14
NCK1P16333 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NCK1P16333 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 AL596087.1-201ENST00000400979 1969 ntBASIC15.94■□□□□ 0.14
NCK1P16333 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.94■□□□□ 0.14
NCK1P16333 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NCK1P16333 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.94■□□□□ 0.14
NCK1P16333 LINC00895-201ENST00000629028 1637 ntBASIC15.94■□□□□ 0.14
NCK1P16333 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
NCK1P16333 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NCK1P16333 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NCK1P16333 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NCK1P16333 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NCK1P16333 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.93■□□□□ 0.14
NCK1P16333 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.93■□□□□ 0.14
NCK1P16333 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.93■□□□□ 0.14
NCK1P16333 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.93■□□□□ 0.14
NCK1P16333 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 IGHV3-41-201ENST00000613121 348 ntBASIC15.93■□□□□ 0.14
NCK1P16333 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.93■□□□□ 0.14
NCK1P16333 AC005363.2-201ENST00000618631 242 ntBASIC15.93■□□□□ 0.14
NCK1P16333 AD001527.2-201ENST00000622994 785 ntBASIC15.93■□□□□ 0.14
NCK1P16333 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 AC092384.3-202ENST00000564646 2873 ntBASIC15.93■□□□□ 0.14
NCK1P16333 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.93■□□□□ 0.14
NCK1P16333 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.93■□□□□ 0.14
NCK1P16333 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NCK1P16333 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
NCK1P16333 AP002414.2-201ENST00000591780 3365 ntBASIC15.92■□□□□ 0.14
NCK1P16333 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NCK1P16333 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms