Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.68■□□□□ 0.42
RARAP10276 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RARAP10276 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.68■□□□□ 0.42
RARAP10276 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RARAP10276 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.68■□□□□ 0.42
RARAP10276 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RARAP10276 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RARAP10276 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.67■□□□□ 0.42
RARAP10276 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 RNPS1P1-201ENST00000507437 918 ntBASIC17.67■□□□□ 0.42
RARAP10276 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.67■□□□□ 0.42
RARAP10276 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.67■□□□□ 0.42
RARAP10276 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
RARAP10276 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
RARAP10276 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RARAP10276 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.67■□□□□ 0.42
RARAP10276 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARAP10276 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RARAP10276 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RARAP10276 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 KRT8P49-201ENST00000604166 1432 ntBASIC17.66■□□□□ 0.42
RARAP10276 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RARAP10276 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RARAP10276 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 OR7E14P-202ENST00000530490 1290 ntBASIC17.66■□□□□ 0.42
RARAP10276 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.66■□□□□ 0.42
RARAP10276 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.66■□□□□ 0.42
RARAP10276 AL121912.1-201ENST00000603683 238 ntBASIC17.66■□□□□ 0.42
RARAP10276 AL691432.3-201ENST00000621860 400 ntBASIC17.66■□□□□ 0.42
RARAP10276 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.66■□□□□ 0.42
RARAP10276 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.66■□□□□ 0.42
RARAP10276 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARAP10276 AL513523.2-202ENST00000427283 2040 ntBASIC17.65■□□□□ 0.42
RARAP10276 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RARAP10276 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RARAP10276 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RARAP10276 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARAP10276 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms