Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-38-2P0DP08 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 AC107890.1-201ENST00000422478 521 ntBASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 ALG1L8P-201ENST00000533887 760 ntBASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 AL671710.1-201ENST00000610245 2349 ntBASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IGHV4-38-2P0DP08 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV4-38-2P0DP08 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 MIR346-201ENST00000362234 95 ntBASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 SPDYE7P-202ENST00000420373 878 ntBASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 KRT18P34-201ENST00000488218 1270 ntBASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
IGHV4-38-2P0DP08 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms