Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINGO3P0C6S8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 BX276092.5-203ENST00000456199 560 ntBASIC16.33■□□□□ 0.2
LINGO3P0C6S8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC112698.1-201ENST00000510299 916 ntBASIC16.33■□□□□ 0.2
LINGO3P0C6S8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AL121672.3-201ENST00000608644 468 ntBASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC016734.2-201ENST00000624325 1377 ntBASIC16.33■□□□□ 0.2
LINGO3P0C6S8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINGO3P0C6S8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 RN7SL606P-201ENST00000472779 293 ntBASIC16.32■□□□□ 0.2
LINGO3P0C6S8 AC068472.1-201ENST00000474589 881 ntBASIC16.32■□□□□ 0.2
LINGO3P0C6S8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.32■□□□□ 0.2
LINGO3P0C6S8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms