Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC1P07992 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ERCC1P07992 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.98□□□□□ -0.01
ERCC1P07992 PMS2P1-201ENST00000431037 1228 ntBASIC14.98□□□□□ -0.01
ERCC1P07992 AC018712.1-201ENST00000455767 687 ntBASIC14.98□□□□□ -0.01
ERCC1P07992 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.98□□□□□ -0.01
ERCC1P07992 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.98□□□□□ -0.01
ERCC1P07992 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.98□□□□□ -0.01
ERCC1P07992 MIR1199-201ENST00000621445 119 ntBASIC14.98□□□□□ -0.01
ERCC1P07992 AL022326.1-202ENST00000641533 845 ntBASIC14.98□□□□□ -0.01
ERCC1P07992 AP000867.4-201ENST00000641616 219 ntBASIC14.98□□□□□ -0.01
ERCC1P07992 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC1P07992 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.98□□□□□ -0.01
ERCC1P07992 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ERCC1P07992 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ERCC1P07992 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.98□□□□□ -0.01
ERCC1P07992 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ERCC1P07992 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ERCC1P07992 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 SLC25A1P3-201ENST00000395415 828 ntBASIC14.97□□□□□ -0.01
ERCC1P07992 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC1P07992 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.97□□□□□ -0.01
ERCC1P07992 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 MTDHP4-201ENST00000600287 670 ntBASIC14.97□□□□□ -0.01
ERCC1P07992 AC019129.2-201ENST00000609837 1235 ntBASIC14.97□□□□□ -0.01
ERCC1P07992 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.97□□□□□ -0.01
ERCC1P07992 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ERCC1P07992 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ERCC1P07992 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ERCC1P07992 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC1P07992 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.96□□□□□ -0.01
ERCC1P07992 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
ERCC1P07992 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.96□□□□□ -0.01
ERCC1P07992 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.96□□□□□ -0.01
ERCC1P07992 IL9RP2-201ENST00000423948 1312 ntBASIC14.96□□□□□ -0.01
ERCC1P07992 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.96□□□□□ -0.01
ERCC1P07992 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
ERCC1P07992 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC1P07992 DOC2GP-204ENST00000639052 2548 ntBASIC14.96□□□□□ -0.01
ERCC1P07992 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC1P07992 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ERCC1P07992 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC1P07992 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC1P07992 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERCC1P07992 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.96□□□□□ -0.01
ERCC1P07992 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ERCC1P07992 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms