Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 KRT8P39-201ENST00000396270 1433 ntBASIC17.04■□□□□ 0.32
HLA-DQB2P05538 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 RHOQP3-201ENST00000437982 621 ntBASIC17.03■□□□□ 0.32
HLA-DQB2P05538 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.03■□□□□ 0.32
HLA-DQB2P05538 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 MIR4515-201ENST00000584082 81 ntBASIC17.03■□□□□ 0.32
HLA-DQB2P05538 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB2P05538 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 HMGA1P7-201ENST00000406908 502 ntBASIC17.02■□□□□ 0.32
HLA-DQB2P05538 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 AC140113.2-201ENST00000604370 208 ntBASIC17.02■□□□□ 0.32
HLA-DQB2P05538 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB2P05538 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB2P05538 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB2P05538 AL118508.1-201ENST00000613502 2345 ntBASIC17.02■□□□□ 0.31
HLA-DQB2P05538 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DQB2P05538 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB2P05538 AC079328.2-201ENST00000561241 3354 ntBASIC17.02■□□□□ 0.31
HLA-DQB2P05538 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB2P05538 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms